Dependency Dashboard

[renovate]

This issue lists Renovate updates and detected dependencies. Read the Dependency Dashboard docs to learn more.

Config Migration Needed

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Open

These updates have all been created already. Click a checkbox below to force a retry/rebase of any.

• Update PhenoGraph digest to 5de5c2b
• Update s2a digest to eb38ae3
• Update dependency umap-learn to v0.5.7
• Update Python to >3.13,<3.14
• Update dependency anndata to v0.11.1
• Update dependency pacmap to ^0.7.0
• Update dependency scanpy to v1.10.4
• Update actions/cache action to v4
• Update actions/checkout action to v4
• Update r-lib/actions action to v2
• Click on this checkbox to rebase all open PRs at once

Detected dependencies

github-actions

.github/workflows/pkgdown.yaml

• actions/checkout v2
• r-lib/actions v1
• r-lib/actions v1
• actions/cache v2

pep621

pyproject.toml

• poetry-core >=1.0.0

poetry

pyproject.toml

• python >3.8.3,<3.10
• anndata >=0.8.0rc1
• umap-learn ^0.5.2
• ForceAtlas2 ^1.0
• pacmap ^0.5.0
• PhenoGraph 1.6.1
• scanpy ^1.8
• s2a 0.3.4

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