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    78 repositories

    • cbioportal-frontend

      Public
      React Frontend of cBioPortal :tada:
      reactmobxcancer-genomics
      TypeScript
      •
      GNU Affero General Public License v3.0
      •366•133•0•64•Updated Feb 3, 2026Feb 3, 2026

    • cbioportal

      Public
      cBioPortal for Cancer Genomics
      visualizationsciencecancer-genomicsprecision-medicine
      Java
      •
      GNU Affero General Public License v3.0
      •799•943•321•43•Updated Feb 3, 2026Feb 3, 2026

    • cbioportal-mcp-qa

      Public
      Python
      •2•3•2•1•Updated Feb 3, 2026Feb 3, 2026

    • cbioportal-mcp

      Public
      Python
      •5•2•2•2•Updated Feb 3, 2026Feb 3, 2026

    • cbioportal-vitessce-proxy

      Public
      TypeScript
      •1•0•2•1•Updated Feb 3, 2026Feb 3, 2026

    • cbioportal-core

      Public
      Externalized cBioPortal Core
      Java
      •23•4•23•9•Updated Feb 3, 2026Feb 3, 2026

    • GSoC

      Public
      Documentation repository of Google Summer of Code (GSoC) project ideas for cBioPortal and related projects
      50•140•30•0•Updated Feb 2, 2026Feb 2, 2026

    • cbioportal-docker-compose

      Public
      Run cBioPortal using Docker Compose
      Shell
      •54•20•4•4•Updated Feb 2, 2026Feb 2, 2026

    • installation-map

      Public
      cBioPortal Installation Map
      TypeScript
      •4•0•0•0•Updated Feb 1, 2026Feb 1, 2026

    • datahub

      Public
      A centralized location for storing curated data from cBioPortal
      HTML
      •138•198•139•20•Updated Jan 30, 2026Jan 30, 2026

    • datahub-study-curation-tools

      Public
      Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.
      HTML
      •
      GNU Affero General Public License v3.0
      •18•21•2•4•Updated Jan 30, 2026Jan 30, 2026

    • cbioportal-test

      Public
      Tests for cBioPortal.
      HTML
      •
      MIT License
      •3•0•0•0•Updated Jan 29, 2026Jan 29, 2026

    • oncotree

      Public
      Go
      •
      Creative Commons Attribution 4.0 International
      •30•46•31•12•Updated Jan 27, 2026Jan 27, 2026

    • cbioportal-helm

      Public
      Helm charts for cBioPortal Kubernetes Deployment
      1•0•1•0•Updated Jan 7, 2026Jan 7, 2026

    • .github

      Public
      README for cBioPortal Org Page
      2•0•0•1•Updated Dec 29, 2025Dec 29, 2025

    • LibreChat

      Public
      Enhanced ChatGPT Clone: Features Agents, MCP, DeepSeek, Anthropic, AWS, OpenAI, Responses API, Azure, Groq, o1, GPT-5, Mistral, OpenRouter, Vertex AI, Gemini, A…
      TypeScript
      •
      MIT License
      •6.7k•0•0•0•Updated Dec 24, 2025Dec 24, 2025

    • cbioportal-article-classification

      Public
      Tool for fetching, classifying, and analyzing papers that cite cBioPortal
      Python
      •0•1•0•0•Updated Dec 20, 2025Dec 20, 2025

    • msk-ecosystems-validator

      Public
      Python
      •0•0•0•0•Updated Nov 21, 2025Nov 21, 2025

    • clickhouse-only-importer-prototype

      Public
      Go
      •0•0•0•0•Updated Nov 5, 2025Nov 5, 2025

    • cellxgene-dash

      Public
      JavaScript
      •0•0•0•0•Updated Oct 23, 2025Oct 23, 2025

    • cancerhotspots

      Public
      Cancer Hotspots
      JavaScript
      •
      GNU Affero General Public License v3.0
      •9•6•4•3•Updated Oct 22, 2025Oct 22, 2025

    • mcp_experiments

      Public
      cBioPortal MCP Experiments
      MIT License
      •0•0•0•0•Updated Sep 16, 2025Sep 16, 2025

    • session-service

      Public
      Java
      •20•7•12•1•Updated Sep 8, 2025Sep 8, 2025

    • h5ad2cbioportaldb

      Public
      Python CLI tool for importing h5ad single-cell files into cBioPortal's ClickHouse database
      Python
      •0•0•0•0•Updated Jun 30, 2025Jun 30, 2025

    • cBioPubChat

      Public
      LLM-powered chatbot for exploring cBioPortal publications.
      Python
      •1•2•0•1•Updated Jun 12, 2025Jun 12, 2025

    • cbio-case-summarizer

      Public
      LLM generated summaries for cases in cBioPortal
      Python
      •
      MIT License
      •0•0•0•1•Updated Jun 5, 2025Jun 5, 2025

    • temp-genie-page

      Public
      HTML
      •0•0•0•0•Updated Apr 7, 2025Apr 7, 2025

    • cbiohubpy

      Public
      Python package and CLI tool simplifying the analysis of data from cBioPortal
      Python
      •
      MIT License
      •1•1•0•0•Updated Jan 2, 2025Jan 2, 2025

    • roadmap

      Public
      cBioPortal Public Roadmap
      0•1•20•0•Updated Dec 30, 2024Dec 30, 2024

    • kc-user-importer

      Public
      Keycloak Legacy Light Client and user import scripts
      Python
      •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024